Idun has a plethora of software preinstalled. Please use module spider to see the full list of available modules and their corresponding versions. The following table provides an incomplete excerpt:
| Type | Software | Description | Usage on Idun |
|---|---|---|---|
| Compilers | cython | Optimizing compiler for Python and the Cython programming language. | |
| GCC | A compiler suite including a C, C++, Objective-C, Fortran, Ada, Go, and D compiler. | ||
| Intel | A compiler suite including a C, C++, and Fortran compiler. | ||
| Applications | Fluent | Software suite for performing Computational Fluid Dynamics (CFD) simulations. | |
| Matlab | Programming language and numerical computing environment. | ||
| OpenFOAM | C++ toolbox for performing CFD simulations and the development of numerical solvers. | ||
| Libraries | Boost | Set of C++ libraries providing support for tasks such as linear algebra, image processing, regular expressions, etc. | |
| FFTW | C library for computing the discrete Fourier transform in one or more dimensions. | See here for more information | |
| GDAL | Translator library for raster and vector geospatial data formats. | ||
| GSL | Numerial C/C++ library with a wide range of numerical routines. | See here for more information | |
| HDF5 | Library for storing and organizing large amounts of (hierarchical) data. | See here for more information | |
| Hypre | Library with scalable linear solvers and multgrid methods. | ||
| Intel MKL | Library with optimized math routines. | ||
| Intel MPI | Message-passing library implementing the MPICH specification. | ||
| Java | Programming language. | ||
| METIS | Set of programs for partitioning graphs and finite element meshes, as well as producing fill reducing orderings for sparse matrices. | ||
| MUMPS | Parallel sparse direct solver for linear algebraic equations. | ||
| netCDF(-Fortran) | Set of libraries and data formats for the creation, access, and sharing of array-oriented scientific data. | See here for more information | |
| OpenMPI | Message-passing library implementing the MPICH specification. | ||
| OpenBLAS | Optimized BLAS library. | See here for more information | |
| ParMETIS | Extension of the METIS library. | ||
| PROJ | Coordinate transformation software for geospatial coordinates. | ||
| ScaLAPACK | Library of high-performance linear algebra routines. | ||
| TensorFlow | Library for high performance numerical computations with strong support for machine and deep learning. | See here for more information | |
| UDUNITS | C library for arithmetic manipulation of units and conversion of numeric values between compatible units. | ||
| Tools | CMake | Tools for building and testing package software. | |
| Go | Programming language. | ||
| ncview | Visual browser for netCDF files. | See here for more information | |
| PAPI | Tools for utilizing the performance counter hardware of microprocessors. | ||
| Python2/3 | Programming language. | ||
| R | Software environment for statistical computing and graphics. | ||
| Python/Packages | Boost.Python | C++ library enabling interoperability between C++ and Python. | |
| h5py | Python interface for the HDF5 binary data format. | ||
| matplotlib | Plotting library for Python. | ||
| mpi4py | Message Passing interface bindings for Python. | ||
| netcfd4-python | Python interface to the netCDF C library. | ||
| numpy | Package for scientific computing with Python. | ||
| pandas | Data structures and data analysis tools for Python. | ||
| scipy | Python software suite for mathematics, science, and engineering. | ||
| virtualenv | Tool to create isolated Python environments. |